Pseudomonas syringae pv. syringae B728a

• Map 1
• T6SS gene clusters 1
• Effectors 1
• Immunity proteins 0
• Recipient susceptibility factors 0
• Regulators 5
• Accessory proteins 0

• NC_007005 (chromosome)

NC_007005 (chromosome)
 

---

Experimental investigation has been performed.
Bioinformatics investigation has been performed

T6SS ID	Type	Organism	Replicon (Accession)	Location	Function
T6SS00086	i4b	Pseudomonas syringae pv. syringae B728a	chromosome (NC_007005)	5866174..5915475	effector translocation; adherence

Experimental investigation has been performed.
Bioinformatics investigation has been performed

Regulator ID	Locus tag (Gene)	Related T6SS	Regulator type	Regulatory pathway	Organism	Replicon (Accession)	Coordinates (Strand)	NCBI ID	Target (Regulation)
REG0148	PSYR_RS19090 (relA)	T6SS00086	protein	(p)ppGpp regulatory pathway	Pseudomonas syringae pv. syringae B728a	chromosome (NC_007005)	4380642..4382885 (-)	499587809	T6SS transcripts (↓)
REG0149	PSYR_RS01070 (spoT)	T6SS00086	protein	(p)ppGpp regulatory pathway	Pseudomonas syringae pv. syringae B728a	chromosome (NC_007005)	223004..225109 (-)	489499092	T6SS transcripts (↓)
REG0150	Psyr_3698 (gacS)	T6SS00086	protein	TCS-HK	Pseudomonas syringae pv. syringae B728a	chromosome (NC_007005)	4385550..4388303 (+)	499587812	T6SS transcription (↓)
REG0151	Psyr_4339 (ladS)	T6SS00086	protein	QS regulatory pathway	Pseudomonas syringae pv. syringae B728a	chromosome (NC_007005)	5191591..5193585 (-)	639463044	T6SS transcription (↓)
REG0152	Psyr_4408 (retS)	T6SS00086	protein	QS regulatory pathway	Pseudomonas syringae pv. syringae B728a	chromosome (NC_007005)	5270882..5273671 (+)	489494774	T6SS transcription (↑)

Experimental investigation has been performed.
Bioinformatics investigation has been performed

Effector ID	Locus tag (Gene)	Classification	Cognate immunity protein	Related T6SS	Organism	Replicon (Accession)	Coordinates (Strand)	NCBI ID
EFF00961	PSYR_RS25780	-	-	T6SS00086	Pseudomonas syringae pv. syringae B728a	chromosome (NC_007005)	5889737..5890255 (+)	66048189

Experimental investigation has been performed.
Bioinformatics investigation has been performed

Immunity protein ID	Locus tag (Gene)	Related T6SS	Organism	Replicon (Accession)	Coordinates (Strand)	Protein GI	Cognate effector

Experimental investigation has been performed.
Bioinformatics investigation has been performed

ID	Locus tag (Gene)	Organism	Replicon (Accession)	Coordinates (Strand)	Protein GI	Response to T6SS attack	Known or putative function

Experimental investigation has been performed.
Bioinformatics investigation has been performed

Accessory protein ID	Locus tag (Gene)	Related T6SS	Type	Organism	Replicon (Accession)	Coordinates (Strand)	Protein GI	Related structure protein	Related effector